Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm15352-201ENSMUST00000118696 270 ntBASIC13.94□□□□□ -0.18
Vcam1P29533 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.94□□□□□ -0.18
Vcam1P29533 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vcam1P29533 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.94□□□□□ -0.18
Vcam1P29533 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Vcam1P29533 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.94□□□□□ -0.18
Vcam1P29533 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.94□□□□□ -0.18
Vcam1P29533 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.94□□□□□ -0.18
Vcam1P29533 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.94□□□□□ -0.18
Vcam1P29533 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vcam1P29533 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.94□□□□□ -0.18
Vcam1P29533 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.94□□□□□ -0.18
Vcam1P29533 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vcam1P29533 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vcam1P29533 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vcam1P29533 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.93□□□□□ -0.18
Vcam1P29533 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Vcam1P29533 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 Gm22920-201ENSMUST00000102175 109 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 Gm14665-201ENSMUST00000122294 557 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.93□□□□□ -0.18
Vcam1P29533 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm27438-201ENSMUST00000183480 110 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 Gm8365-201ENSMUST00000197334 648 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.93□□□□□ -0.18
Vcam1P29533 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vcam1P29533 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.93□□□□□ -0.18
Vcam1P29533 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcam1P29533 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Vcam1P29533 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vcam1P29533 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Gm14193-201ENSMUST00000105067 153 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Vcam1P29533 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.92□□□□□ -0.18
Vcam1P29533 Gm13888-201ENSMUST00000119148 422 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 Gm14585-201ENSMUST00000120713 634 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.92□□□□□ -0.18
Vcam1P29533 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vcam1P29533 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.92□□□□□ -0.18
Vcam1P29533 Gm10731-201ENSMUST00000181171 448 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 Gm45550-201ENSMUST00000209380 946 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms