Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13□□□□□ -0.33
Mmp3P28862 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13□□□□□ -0.33
Mmp3P28862 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Gm6189-201ENSMUST00000164487 2082 ntBASIC13□□□□□ -0.33
Mmp3P28862 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp3P28862 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Mmp3P28862 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Gm15610-201ENSMUST00000120584 195 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Gm11660-201ENSMUST00000120955 412 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Gm7467-201ENSMUST00000185173 652 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Gm3508-201ENSMUST00000186012 792 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Gm10774-201ENSMUST00000188689 204 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.99□□□□□ -0.33
Mmp3P28862 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.99□□□□□ -0.33
Mmp3P28862 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Mmp3P28862 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp3P28862 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Mmp3P28862 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Mmp3P28862 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Mmp3P28862 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Mmp3P28862 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.98□□□□□ -0.33
Mmp3P28862 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Mmp3P28862 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.98□□□□□ -0.33
Mmp3P28862 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Mmp3P28862 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Mmp3P28862 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Mmp3P28862 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.98□□□□□ -0.33
Mmp3P28862 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Mmp3P28862 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.98□□□□□ -0.33
Mmp3P28862 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.98□□□□□ -0.33
Mmp3P28862 Mir7686-201ENSMUST00000200604 57 ntBASIC12.98□□□□□ -0.33
Mmp3P28862 Gm5051-201ENSMUST00000204085 485 ntBASIC12.98□□□□□ -0.33
Mmp3P28862 Gm44126-201ENSMUST00000204831 514 ntBASIC12.98□□□□□ -0.33
Mmp3P28862 Gm45575-201ENSMUST00000210283 548 ntBASIC12.98□□□□□ -0.33
Mmp3P28862 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.98□□□□□ -0.33
Mmp3P28862 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.98□□□□□ -0.33
Mmp3P28862 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Mmp3P28862 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Mmp3P28862 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp3P28862 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.97□□□□□ -0.33
Mmp3P28862 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms