Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BgnP28653 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BgnP28653 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BgnP28653 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
BgnP28653 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
BgnP28653 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.24□□□□□ -0.61
BgnP28653 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.24□□□□□ -0.61
BgnP28653 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
BgnP28653 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
BgnP28653 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
BgnP28653 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Snord83b-201ENSMUST00000104546 94 ntBASIC11.24□□□□□ -0.61
BgnP28653 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
BgnP28653 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Gm37042-201ENSMUST00000193816 581 ntBASIC11.24□□□□□ -0.61
BgnP28653 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.24□□□□□ -0.61
BgnP28653 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
BgnP28653 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
BgnP28653 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.24□□□□□ -0.61
BgnP28653 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BgnP28653 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.24□□□□□ -0.61
BgnP28653 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
BgnP28653 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.23□□□□□ -0.61
BgnP28653 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.23□□□□□ -0.61
BgnP28653 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
BgnP28653 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
BgnP28653 Gm27243-201ENSMUST00000183964 521 ntBASIC11.23□□□□□ -0.61
BgnP28653 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
BgnP28653 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
BgnP28653 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.23□□□□□ -0.61
BgnP28653 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.23□□□□□ -0.61
BgnP28653 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BgnP28653 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.23□□□□□ -0.61
BgnP28653 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
BgnP28653 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
BgnP28653 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
BgnP28653 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BgnP28653 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms