Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nfkb1P25799 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm7722-201ENSMUST00000120646 741 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm22902-201ENSMUST00000158488 302 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm20426-201ENSMUST00000173657 440 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm43378-201ENSMUST00000199336 582 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm7848-201ENSMUST00000210739 718 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm17827-201ENSMUST00000211825 742 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm5455-201ENSMUST00000058710 715 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nfkb1P25799 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nfkb1P25799 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nfkb1P25799 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nfkb1P25799 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Nfkb1P25799 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nfkb1P25799 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nfkb1P25799 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nfkb1P25799 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
Nfkb1P25799 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nfkb1P25799 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nfkb1P25799 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nfkb1P25799 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
Nfkb1P25799 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Rprl1-201ENSMUST00000158050 327 ntBASIC12.52□□□□□ -0.41
Nfkb1P25799 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.52□□□□□ -0.41
Nfkb1P25799 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.52□□□□□ -0.41
Nfkb1P25799 Gm42997-202ENSMUST00000200321 985 ntBASIC12.52□□□□□ -0.41
Nfkb1P25799 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.52□□□□□ -0.41
Nfkb1P25799 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.52□□□□□ -0.41
Nfkb1P25799 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.52□□□□□ -0.41
Nfkb1P25799 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.52□□□□□ -0.41
Nfkb1P25799 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nfkb1P25799 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.52□□□□□ -0.41
Nfkb1P25799 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.52□□□□□ -0.41
Nfkb1P25799 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Gm15515-201ENSMUST00000117827 822 ntBASIC12.51□□□□□ -0.41
Nfkb1P25799 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nfkb1P25799 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.51□□□□□ -0.41
Nfkb1P25799 Gm37986-201ENSMUST00000193285 383 ntBASIC12.51□□□□□ -0.41
Nfkb1P25799 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nfkb1P25799 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.51□□□□□ -0.41
Nfkb1P25799 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.51□□□□□ -0.41
Nfkb1P25799 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms