Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.02□□□□□ -0.49
Srp54P14576 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Srp54P14576 Gm27627-201ENSMUST00000183644 150 ntBASIC12.02□□□□□ -0.49
Srp54P14576 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Srp54P14576 Gm19994-201ENSMUST00000217086 586 ntBASIC12.02□□□□□ -0.49
Srp54P14576 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.02□□□□□ -0.49
Srp54P14576 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.02□□□□□ -0.49
Srp54P14576 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Srp54P14576 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.02□□□□□ -0.49
Srp54P14576 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.02□□□□□ -0.49
Srp54P14576 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.02□□□□□ -0.49
Srp54P14576 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Srp54P14576 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.02□□□□□ -0.49
Srp54P14576 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Srp54P14576 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54P14576 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Srp54P14576 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.01□□□□□ -0.49
Srp54P14576 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Srp54P14576 Gm11989-201ENSMUST00000117240 672 ntBASIC12.01□□□□□ -0.49
Srp54P14576 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.01□□□□□ -0.49
Srp54P14576 Gm11362-201ENSMUST00000118838 850 ntBASIC12.01□□□□□ -0.49
Srp54P14576 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Srp54P14576 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.01□□□□□ -0.49
Srp54P14576 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.01□□□□□ -0.49
Srp54P14576 Gm18730-201ENSMUST00000218038 343 ntBASIC12.01□□□□□ -0.49
Srp54P14576 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.01□□□□□ -0.49
Srp54P14576 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.01□□□□□ -0.49
Srp54P14576 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.01□□□□□ -0.49
Srp54P14576 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.01□□□□□ -0.49
Srp54P14576 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54P14576 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Srp54P14576 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Srp54P14576 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Srp54P14576 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Srp54P14576 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Srp54P14576 Gm16481-201ENSMUST00000119074 1227 ntBASIC12□□□□□ -0.49
Srp54P14576 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12□□□□□ -0.49
Srp54P14576 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Srp54P14576 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12□□□□□ -0.49
Srp54P14576 B9d1os-201ENSMUST00000137010 674 ntBASIC12□□□□□ -0.49
Srp54P14576 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12□□□□□ -0.49
Srp54P14576 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12□□□□□ -0.49
Srp54P14576 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54P14576 Abhd11os-203ENSMUST00000222613 363 ntBASIC12□□□□□ -0.49
Srp54P14576 AC159205.5-202ENSMUST00000224849 386 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms