Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Gm14193-201ENSMUST00000105067 153 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Gm16071-201ENSMUST00000119589 793 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Gm11675-201ENSMUST00000121873 832 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Mir1901-201ENSMUST00000122616 78 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Gm4034-201ENSMUST00000187674 480 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Gm17826-201ENSMUST00000189720 798 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.72□□□□□ -0.69
Ccl3P10855 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.72□□□□□ -0.69
Ccl3P10855 Gm18041-201ENSMUST00000218210 618 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.72□□□□□ -0.69
Ccl3P10855 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Ccl3P10855 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Ccl3P10855 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Ccl3P10855 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccl3P10855 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.71□□□□□ -0.69
Ccl3P10855 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.71□□□□□ -0.69
Ccl3P10855 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Gm12899-201ENSMUST00000120565 551 ntBASIC10.71□□□□□ -0.69
Ccl3P10855 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.71□□□□□ -0.69
Ccl3P10855 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccl3P10855 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.71□□□□□ -0.69
Ccl3P10855 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Gm10731-201ENSMUST00000181171 448 ntBASIC10.71□□□□□ -0.69
Ccl3P10855 Gm4654-201ENSMUST00000183305 982 ntBASIC10.71□□□□□ -0.69
Ccl3P10855 Mir6998-201ENSMUST00000183343 64 ntBASIC10.71□□□□□ -0.69
Ccl3P10855 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.71□□□□□ -0.69
Ccl3P10855 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.71□□□□□ -0.69
Ccl3P10855 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.71□□□□□ -0.69
Ccl3P10855 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl3P10855 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccl3P10855 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ccl3P10855 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccl3P10855 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Ccl3P10855 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccl3P10855 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ccl3P10855 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccl3P10855 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms