Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NclP09405 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Gm13035-201ENSMUST00000117496 342 ntBASIC18.04■□□□□ 0.48
NclP09405 Gm23699-201ENSMUST00000158835 135 ntBASIC18.04■□□□□ 0.48
NclP09405 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NclP09405 Gm4157-201ENSMUST00000211647 679 ntBASIC18.04■□□□□ 0.48
NclP09405 Gm5369-201ENSMUST00000217499 588 ntBASIC18.04■□□□□ 0.48
NclP09405 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NclP09405 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NclP09405 AC171277.1-201ENSMUST00000216902 1441 ntBASIC18.04■□□□□ 0.48
NclP09405 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NclP09405 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Gm9361-201ENSMUST00000198695 1507 ntBASIC18.03■□□□□ 0.48
NclP09405 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Gm26286-201ENSMUST00000104166 134 ntBASIC18.03■□□□□ 0.48
NclP09405 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC18.03■□□□□ 0.48
NclP09405 Gm14058-201ENSMUST00000116082 735 ntBASIC18.03■□□□□ 0.48
NclP09405 Gm13611-201ENSMUST00000118269 318 ntBASIC18.03■□□□□ 0.48
NclP09405 Gm12501-201ENSMUST00000119163 529 ntBASIC18.03■□□□□ 0.48
NclP09405 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC18.03■□□□□ 0.48
NclP09405 Gm12196-201ENSMUST00000120954 262 ntBASIC18.03■□□□□ 0.48
NclP09405 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC18.03■□□□□ 0.48
NclP09405 H2-Q3-201ENSMUST00000172583 608 ntBASIC18.03■□□□□ 0.48
NclP09405 Gm8343-201ENSMUST00000182705 994 ntBASIC18.03■□□□□ 0.48
NclP09405 Gm807-202ENSMUST00000224929 408 ntBASIC18.03■□□□□ 0.48
NclP09405 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC18.03■□□□□ 0.48
NclP09405 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NclP09405 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC18.03■□□□□ 0.48
NclP09405 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NclP09405 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NclP09405 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NclP09405 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NclP09405 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC18.02■□□□□ 0.48
NclP09405 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Gm44260-201ENSMUST00000204946 2094 ntBASIC18.02■□□□□ 0.48
NclP09405 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Gm12176-201ENSMUST00000121420 875 ntBASIC18.02■□□□□ 0.48
NclP09405 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
NclP09405 Gm7207-201ENSMUST00000211575 1067 ntBASIC18.02■□□□□ 0.48
NclP09405 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC18.02■□□□□ 0.48
NclP09405 Gm7049-201ENSMUST00000223520 1712 ntBASIC18.02■□□□□ 0.48
NclP09405 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NclP09405 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NclP09405 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NclP09405 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NclP09405 Gm17435-202ENSMUST00000212699 1998 ntBASIC18.02■□□□□ 0.47
NclP09405 Gm6580-201ENSMUST00000117504 1357 ntBASIC18.02■□□□□ 0.47
NclP09405 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC18.02■□□□□ 0.47
NclP09405 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NclP09405 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NclP09405 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
NclP09405 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms