Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.38□□□□□ -0.59
Sod1P08228 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Sod1P08228 Mir6998-201ENSMUST00000183343 64 ntBASIC11.38□□□□□ -0.59
Sod1P08228 Gm28388-201ENSMUST00000186262 437 ntBASIC11.38□□□□□ -0.59
Sod1P08228 Gm38151-201ENSMUST00000195085 289 ntBASIC11.38□□□□□ -0.59
Sod1P08228 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.38□□□□□ -0.59
Sod1P08228 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.38□□□□□ -0.59
Sod1P08228 Gm45113-201ENSMUST00000207518 165 ntBASIC11.38□□□□□ -0.59
Sod1P08228 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sod1P08228 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.38□□□□□ -0.59
Sod1P08228 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.38□□□□□ -0.59
Sod1P08228 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.38□□□□□ -0.59
Sod1P08228 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.38□□□□□ -0.59
Sod1P08228 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.38□□□□□ -0.59
Sod1P08228 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.38□□□□□ -0.59
Sod1P08228 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sod1P08228 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Sod1P08228 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sod1P08228 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sod1P08228 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sod1P08228 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sod1P08228 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.37□□□□□ -0.59
Sod1P08228 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.37□□□□□ -0.59
Sod1P08228 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sod1P08228 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Sod1P08228 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.37□□□□□ -0.59
Sod1P08228 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Gm25076-201ENSMUST00000104098 132 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Gm16397-201ENSMUST00000122201 494 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Mir1956-201ENSMUST00000157748 65 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.37□□□□□ -0.59
Sod1P08228 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Gm8492-201ENSMUST00000182375 987 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Gm3551-201ENSMUST00000190750 664 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.37□□□□□ -0.59
Sod1P08228 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.37□□□□□ -0.59
Sod1P08228 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.37□□□□□ -0.59
Sod1P08228 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Sod1P08228 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.37□□□□□ -0.59
Sod1P08228 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Sod1P08228 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.37□□□□□ -0.59
Sod1P08228 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sod1P08228 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sod1P08228 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sod1P08228 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sod1P08228 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.36□□□□□ -0.59
Sod1P08228 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sod1P08228 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms