Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
P06344 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.86□□□□□ -0.67
P06344 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
P06344 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
P06344 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Gm13996-201ENSMUST00000118456 430 ntBASIC10.86□□□□□ -0.67
P06344 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
P06344 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
P06344 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.86□□□□□ -0.67
P06344 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.86□□□□□ -0.67
P06344 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.86□□□□□ -0.67
P06344 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.86□□□□□ -0.67
P06344 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Gm8913-201ENSMUST00000209491 641 ntBASIC10.86□□□□□ -0.67
P06344 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.86□□□□□ -0.67
P06344 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.86□□□□□ -0.67
P06344 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
P06344 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P06344 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.86□□□□□ -0.67
P06344 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
P06344 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
P06344 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
P06344 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.85□□□□□ -0.67
P06344 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P06344 Gm11989-201ENSMUST00000117240 672 ntBASIC10.85□□□□□ -0.67
P06344 Gm11439-201ENSMUST00000118598 409 ntBASIC10.85□□□□□ -0.67
P06344 Gm11362-201ENSMUST00000118838 850 ntBASIC10.85□□□□□ -0.67
P06344 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.85□□□□□ -0.67
P06344 Gm14208-201ENSMUST00000119645 678 ntBASIC10.85□□□□□ -0.67
P06344 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.85□□□□□ -0.67
P06344 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.85□□□□□ -0.67
P06344 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.85□□□□□ -0.67
P06344 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms