Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC8.89□□□□□ -0.99
TcraP01849 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
TcraP01849 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC8.89□□□□□ -0.99
TcraP01849 Gm6458-201ENSMUST00000211573 635 ntBASIC8.89□□□□□ -0.99
TcraP01849 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC8.89□□□□□ -0.99
TcraP01849 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.89□□□□□ -0.99
TcraP01849 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
TcraP01849 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC8.89□□□□□ -0.99
TcraP01849 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
TcraP01849 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
TcraP01849 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
TcraP01849 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
TcraP01849 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TcraP01849 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Gm15321-201ENSMUST00000121290 288 ntBASIC8.88□□□□□ -0.99
TcraP01849 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Gm45195-201ENSMUST00000205597 1008 ntBASIC8.88□□□□□ -0.99
TcraP01849 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC8.88□□□□□ -0.99
TcraP01849 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 AC124732.1-201ENSMUST00000221551 910 ntBASIC8.88□□□□□ -0.99
TcraP01849 Wdyhv1-203ENSMUST00000226889 394 ntBASIC8.88□□□□□ -0.99
TcraP01849 AC132317.1-201ENSMUST00000227227 962 ntBASIC8.88□□□□□ -0.99
TcraP01849 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC8.88□□□□□ -0.99
TcraP01849 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC8.88□□□□□ -0.99
TcraP01849 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
TcraP01849 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.88□□□□□ -0.99
TcraP01849 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC8.88□□□□□ -0.99
TcraP01849 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TcraP01849 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TcraP01849 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TcraP01849 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC8.87□□□□□ -0.99
TcraP01849 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
TcraP01849 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
TcraP01849 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TcraP01849 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TcraP01849 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms