Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.57□□□□□ -0.4
Syn1O88935 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.57□□□□□ -0.4
Syn1O88935 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.57□□□□□ -0.4
Syn1O88935 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.57□□□□□ -0.4
Syn1O88935 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.57□□□□□ -0.4
Syn1O88935 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.57□□□□□ -0.4
Syn1O88935 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.56□□□□□ -0.4
Syn1O88935 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.56□□□□□ -0.4
Syn1O88935 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm14274-201ENSMUST00000117182 615 ntBASIC12.56□□□□□ -0.4
Syn1O88935 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.56□□□□□ -0.4
Syn1O88935 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.56□□□□□ -0.4
Syn1O88935 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.56□□□□□ -0.4
Syn1O88935 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syn1O88935 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.56□□□□□ -0.4
Syn1O88935 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syn1O88935 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Syn1O88935 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.55□□□□□ -0.4
Syn1O88935 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syn1O88935 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Syn1O88935 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syn1O88935 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Syn1O88935 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syn1O88935 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Syn1O88935 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.55□□□□□ -0.4
Syn1O88935 Gm11979-201ENSMUST00000119629 743 ntBASIC12.55□□□□□ -0.4
Syn1O88935 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.55□□□□□ -0.4
Syn1O88935 Gm15744-201ENSMUST00000161734 213 ntBASIC12.55□□□□□ -0.4
Syn1O88935 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Syn1O88935 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.55□□□□□ -0.4
Syn1O88935 Gm44158-201ENSMUST00000203881 505 ntBASIC12.55□□□□□ -0.4
Syn1O88935 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.55□□□□□ -0.4
Syn1O88935 Gm18041-201ENSMUST00000218210 618 ntBASIC12.55□□□□□ -0.4
Syn1O88935 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.55□□□□□ -0.4
Syn1O88935 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.55□□□□□ -0.4
Syn1O88935 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Syn1O88935 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syn1O88935 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms