Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hcn1O88704 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hcn1O88704 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.69□□□□□ -0.54
Hcn1O88704 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Hcn1O88704 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.68□□□□□ -0.54
Hcn1O88704 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hcn1O88704 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hcn1O88704 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcn1O88704 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcn1O88704 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcn1O88704 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcn1O88704 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcn1O88704 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcn1O88704 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 Gm13342-201ENSMUST00000121055 207 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hcn1O88704 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.68□□□□□ -0.54
Hcn1O88704 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.68□□□□□ -0.54
Hcn1O88704 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Hcn1O88704 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Mir6420-201ENSMUST00000185032 102 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Hcn1O88704 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.68□□□□□ -0.54
Hcn1O88704 Gm43822-201ENSMUST00000200285 476 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 Gm3961-201ENSMUST00000204425 994 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.68□□□□□ -0.54
Hcn1O88704 Morn2-202ENSMUST00000227729 656 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcn1O88704 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hcn1O88704 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.68□□□□□ -0.54
Hcn1O88704 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.68□□□□□ -0.54
Hcn1O88704 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.68□□□□□ -0.54
Hcn1O88704 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcn1O88704 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hcn1O88704 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hcn1O88704 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.67□□□□□ -0.54
Hcn1O88704 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.67□□□□□ -0.54
Hcn1O88704 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hcn1O88704 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.67□□□□□ -0.54
Hcn1O88704 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.67□□□□□ -0.54
Hcn1O88704 Gm2991-201ENSMUST00000173338 480 ntBASIC11.67□□□□□ -0.54
Hcn1O88704 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hcn1O88704 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.67□□□□□ -0.54
Hcn1O88704 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.67□□□□□ -0.54
Hcn1O88704 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hcn1O88704 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcn1O88704 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms