Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ubr1O70481 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ubr1O70481 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC15.49■□□□□ 0.07
Ubr1O70481 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ubr1O70481 Gm18776-201ENSMUST00000188833 654 ntBASIC15.49■□□□□ 0.07
Ubr1O70481 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC15.49■□□□□ 0.07
Ubr1O70481 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC15.49■□□□□ 0.07
Ubr1O70481 Gm39288-201ENSMUST00000210554 446 ntBASIC15.49■□□□□ 0.07
Ubr1O70481 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Ubr1O70481 AC122346.3-201ENSMUST00000223983 306 ntBASIC15.49■□□□□ 0.07
Ubr1O70481 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Ubr1O70481 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC15.48■□□□□ 0.07
Ubr1O70481 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.48■□□□□ 0.07
Ubr1O70481 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Gm18059-201ENSMUST00000208073 580 ntBASIC15.48■□□□□ 0.07
Ubr1O70481 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 Gm45410-201ENSMUST00000211331 1093 ntBASIC15.48■□□□□ 0.07
Ubr1O70481 AC114645.1-201ENSMUST00000215831 187 ntBASIC15.48■□□□□ 0.07
Ubr1O70481 Gm16380-201ENSMUST00000077997 478 ntBASIC15.48■□□□□ 0.07
Ubr1O70481 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ubr1O70481 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ubr1O70481 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr1O70481 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ubr1O70481 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Ubr1O70481 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Gm24398-201ENSMUST00000157870 109 ntBASIC15.47■□□□□ 0.07
Ubr1O70481 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 AC238811.4-201ENSMUST00000178019 1246 ntBASIC15.47■□□□□ 0.07
Ubr1O70481 AC238940.3-201ENSMUST00000178830 1246 ntBASIC15.47■□□□□ 0.07
Ubr1O70481 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Gm3726-201ENSMUST00000203110 785 ntBASIC15.47■□□□□ 0.07
Ubr1O70481 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC15.47■□□□□ 0.07
Ubr1O70481 Gm21759-201ENSMUST00000178345 1828 ntBASIC15.47■□□□□ 0.07
Ubr1O70481 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ubr1O70481 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Ubr1O70481 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ubr1O70481 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ubr1O70481 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Gm18294-201ENSMUST00000176980 1748 ntBASIC15.47■□□□□ 0.07
Ubr1O70481 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC15.47■□□□□ 0.07
Ubr1O70481 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Ubr1O70481 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC15.47■□□□□ 0.07
Ubr1O70481 Ighv2-1-201ENSMUST00000170946 353 ntBASIC15.47■□□□□ 0.07
Ubr1O70481 Gm28324-201ENSMUST00000187913 264 ntBASIC15.47■□□□□ 0.07
Ubr1O70481 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15.47■□□□□ 0.07
Ubr1O70481 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr1O70481 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.46■□□□□ 0.07
Ubr1O70481 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr1O70481 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr1O70481 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr1O70481 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms