Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.03□□□□□ -0.64
Rnf13O54965 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf13O54965 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf13O54965 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf13O54965 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.03□□□□□ -0.64
Rnf13O54965 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rnf13O54965 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rnf13O54965 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Rnf13O54965 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.02□□□□□ -0.64
Rnf13O54965 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.64
Rnf13O54965 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf13O54965 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Rnf13O54965 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rnf13O54965 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.02□□□□□ -0.65
Rnf13O54965 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rnf13O54965 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Rnf13O54965 Gm9083-201ENSMUST00000120423 819 ntBASIC11.02□□□□□ -0.65
Rnf13O54965 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.02□□□□□ -0.65
Rnf13O54965 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.02□□□□□ -0.65
Rnf13O54965 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Gm8018-201ENSMUST00000173536 789 ntBASIC11.02□□□□□ -0.65
Rnf13O54965 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Gm27839-201ENSMUST00000184242 106 ntBASIC11.02□□□□□ -0.65
Rnf13O54965 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.02□□□□□ -0.65
Rnf13O54965 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.02□□□□□ -0.65
Rnf13O54965 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.02□□□□□ -0.65
Rnf13O54965 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.02□□□□□ -0.65
Rnf13O54965 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.02□□□□□ -0.65
Rnf13O54965 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rnf13O54965 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.02□□□□□ -0.65
Rnf13O54965 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rnf13O54965 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf13O54965 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.01□□□□□ -0.65
Rnf13O54965 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.01□□□□□ -0.65
Rnf13O54965 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.01□□□□□ -0.65
Rnf13O54965 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.01□□□□□ -0.65
Rnf13O54965 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Rnf13O54965 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf13O54965 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms