Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh9F8VPK8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.46□□□□□ -0.42
Pcdh9F8VPK8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Gm12742-201ENSMUST00000117326 410 ntBASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Pcdh9F8VPK8 Gm8062-201ENSMUST00000139696 444 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms