Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gm13297-201ENSMUST00000120205 934 ntBASIC12.51□□□□□ -0.41
Atf6F6VAN0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.51□□□□□ -0.41
Atf6F6VAN0 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.51□□□□□ -0.41
Atf6F6VAN0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Atf6F6VAN0 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.5□□□□□ -0.41
Atf6F6VAN0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.5□□□□□ -0.41
Atf6F6VAN0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Gm27501-201ENSMUST00000183599 107 ntBASIC12.5□□□□□ -0.41
Atf6F6VAN0 Gm28196-201ENSMUST00000187719 640 ntBASIC12.5□□□□□ -0.41
Atf6F6VAN0 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Gm42693-201ENSMUST00000196779 631 ntBASIC12.5□□□□□ -0.41
Atf6F6VAN0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Atf6F6VAN0 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.5□□□□□ -0.41
Atf6F6VAN0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.5□□□□□ -0.41
Atf6F6VAN0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6F6VAN0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms