Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gm8731-201ENSMUST00000118088 412 ntBASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gm25072-201ENSMUST00000175233 235 ntBASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gm9358-201ENSMUST00000183067 927 ntBASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn2B2RVW2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm13916-201ENSMUST00000117368 628 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm15352-201ENSMUST00000118696 270 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm16071-201ENSMUST00000119589 793 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm12899-201ENSMUST00000120565 551 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm11660-201ENSMUST00000120955 412 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm22138-201ENSMUST00000158748 128 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm8492-201ENSMUST00000182375 987 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm29155-201ENSMUST00000185910 269 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm28324-201ENSMUST00000187913 264 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm17826-201ENSMUST00000189720 798 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm44980-201ENSMUST00000205826 314 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clrn2B2RVW2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.04□□□□□ -0.16
Clrn2B2RVW2 Gm8815-201ENSMUST00000173809 620 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms