Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 AC166361.2-201ENSMUST00000219269 1415 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm9673-201ENSMUST00000119287 781 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Zcwpw2-203ENSMUST00000187803 372 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 AC154354.1-203ENSMUST00000225565 1364 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm14005-210ENSMUST00000225087 1413 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm11191-201ENSMUST00000117231 610 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm25830-201ENSMUST00000158923 132 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm8181-201ENSMUST00000062242 669 ntBASIC9.78□□□□□ -0.84
Chd6A3KFM7 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd6A3KFM7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Gm13456-201ENSMUST00000118928 1365 ntBASIC9.77□□□□□ -0.84
Chd6A3KFM7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.77□□□□□ -0.84
Chd6A3KFM7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Gm44216-201ENSMUST00000203942 157 ntBASIC9.77□□□□□ -0.84
Chd6A3KFM7 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Chd6A3KFM7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms