Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.68□□□□□ -0.38
Scn1aA2APX8 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.68□□□□□ -0.38
Scn1aA2APX8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Gm38117-201ENSMUST00000194653 939 ntBASIC12.68□□□□□ -0.38
Scn1aA2APX8 Gm38151-201ENSMUST00000195085 289 ntBASIC12.68□□□□□ -0.38
Scn1aA2APX8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.68□□□□□ -0.38
Scn1aA2APX8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Spcs1-203ENSMUST00000226374 592 ntBASIC12.68□□□□□ -0.38
Scn1aA2APX8 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.68□□□□□ -0.38
Scn1aA2APX8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.68□□□□□ -0.38
Scn1aA2APX8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm15207-201ENSMUST00000119259 442 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm8566-201ENSMUST00000120174 465 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm23085-201ENSMUST00000157849 293 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm4157-201ENSMUST00000211647 679 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm2553-201ENSMUST00000215986 605 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm1821-202ENSMUST00000227415 750 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm12036-201ENSMUST00000120008 530 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gm15610-201ENSMUST00000120584 195 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Mir7686-201ENSMUST00000200604 57 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms