Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ubr4A2AN08 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Gm42591-201ENSMUST00000197249 700 ntBASIC6.23□□□□□ -1.41
Ubr4A2AN08 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ubr4A2AN08 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC6.23□□□□□ -1.41
Ubr4A2AN08 Mir339-201ENSMUST00000083659 96 ntBASIC6.23□□□□□ -1.41
Ubr4A2AN08 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm5053-201ENSMUST00000208361 1678 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Mir453-201ENSMUST00000104732 82 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Mir6396-201ENSMUST00000183603 111 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm42751-201ENSMUST00000198065 559 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Adra1a-206ENSMUST00000225182 2337 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm5639-201ENSMUST00000122305 2403 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 AC102523.1-201ENSMUST00000228706 1144 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm24140-201ENSMUST00000122773 326 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Mir6981-201ENSMUST00000184293 115 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm8828-201ENSMUST00000196786 1290 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm5705-201ENSMUST00000066241 711 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm14153-201ENSMUST00000119923 1139 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm14699-201ENSMUST00000122340 228 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm38337-201ENSMUST00000193986 599 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm37688-201ENSMUST00000195195 465 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Dapk1-207ENSMUST00000226059 5009 ntBASIC6.22□□□□□ -1.41
Ubr4A2AN08 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms