Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pkd2l1A2A259 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm24830-201ENSMUST00000102024 166 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm25890-201ENSMUST00000177643 165 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm22614-201ENSMUST00000178300 165 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm5904-201ENSMUST00000210286 865 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm22042-201ENSMUST00000082989 165 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm26232-201ENSMUST00000083360 166 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm24136-201ENSMUST00000083374 165 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Gm26110-201ENSMUST00000083971 165 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pkd2l1A2A259 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pkd2l1A2A259 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Gm14704-201ENSMUST00000120300 874 ntBASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Gm13813-201ENSMUST00000120998 787 ntBASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Gm18753-201ENSMUST00000201000 566 ntBASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.95□□□□□ -0.5
Pkd2l1A2A259 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms