Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.9□□□□□ -0.19
Ccdc112A0AUP1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.9□□□□□ -0.19
Ccdc112A0AUP1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Gm24934-201ENSMUST00000103764 111 ntBASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Gm37201-201ENSMUST00000191845 523 ntBASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc112A0AUP1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Gm6266-201ENSMUST00000203844 806 ntBASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc112A0AUP1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms