Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Gm12241-201ENSMUST00000118330 726 ntBASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Gm35960-201ENSMUST00000202712 767 ntBASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb2S4R1M3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Gm11222-201ENSMUST00000119005 738 ntBASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.17□□□□□ -0.46
H2afb2S4R1M3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Gm7399-201ENSMUST00000032395 858 ntBASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb2S4R1M3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms