Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gm2991-201ENSMUST00000173338 480 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gm38341-201ENSMUST00000195357 515 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gm44364-201ENSMUST00000198368 141 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gm43758-201ENSMUST00000199500 367 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim3Q9R1R2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm15703-201ENSMUST00000120250 880 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm14760-201ENSMUST00000121831 999 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm44124-201ENSMUST00000204159 472 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm7783-201ENSMUST00000204795 781 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm21769-201ENSMUST00000211922 111 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim3Q9R1R2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms