Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.65□□□□□ -0.22
AmfrQ9R049 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
AmfrQ9R049 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
AmfrQ9R049 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AmfrQ9R049 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.64□□□□□ -0.23
AmfrQ9R049 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.64□□□□□ -0.23
AmfrQ9R049 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
AmfrQ9R049 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.64□□□□□ -0.23
AmfrQ9R049 Gm9022-201ENSMUST00000182482 992 ntBASIC13.64□□□□□ -0.23
AmfrQ9R049 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.64□□□□□ -0.23
AmfrQ9R049 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.64□□□□□ -0.23
AmfrQ9R049 Gm30285-201ENSMUST00000214614 422 ntBASIC13.64□□□□□ -0.23
AmfrQ9R049 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.64□□□□□ -0.23
AmfrQ9R049 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AmfrQ9R049 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AmfrQ9R049 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AmfrQ9R049 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.63□□□□□ -0.23
AmfrQ9R049 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
AmfrQ9R049 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AmfrQ9R049 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.63□□□□□ -0.23
AmfrQ9R049 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.63□□□□□ -0.23
AmfrQ9R049 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.63□□□□□ -0.23
AmfrQ9R049 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.63□□□□□ -0.23
AmfrQ9R049 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.63□□□□□ -0.23
AmfrQ9R049 Gm42599-201ENSMUST00000201308 469 ntBASIC13.63□□□□□ -0.23
AmfrQ9R049 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.63□□□□□ -0.23
AmfrQ9R049 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
AmfrQ9R049 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.63□□□□□ -0.23
AmfrQ9R049 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.63□□□□□ -0.23
AmfrQ9R049 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AmfrQ9R049 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.62□□□□□ -0.23
AmfrQ9R049 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms