Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm12621-201ENSMUST00000177760 382 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm12615-201ENSMUST00000177970 382 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm12622-201ENSMUST00000177975 382 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm12627-201ENSMUST00000178412 382 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm12625-201ENSMUST00000179122 382 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm12614-201ENSMUST00000179586 382 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm12613-201ENSMUST00000180323 382 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Mir7677-201ENSMUST00000184226 67 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm19353-201ENSMUST00000184561 445 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm270-201ENSMUST00000223010 976 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim54Q9ERP3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Paupar-201ENSMUST00000194826 3482 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm13035-201ENSMUST00000117496 342 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm25881-201ENSMUST00000157783 103 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Rprl1-201ENSMUST00000158050 327 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm9550-201ENSMUST00000161130 862 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Ntng1-201ENSMUST00000051253 327 ntBASIC13.21□□□□□ -0.29
Trim54Q9ERP3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim54Q9ERP3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim54Q9ERP3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Gm12165-201ENSMUST00000117047 342 ntBASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Gm37246-201ENSMUST00000192665 835 ntBASIC13.2□□□□□ -0.3
Trim54Q9ERP3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.2□□□□□ -0.3
Trim54Q9ERP3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms