Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm24844-201ENSMUST00000158679 127 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm44506-201ENSMUST00000206278 965 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm45500-201ENSMUST00000211676 803 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-4Q9EQM3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Gm9135-201ENSMUST00000182963 990 ntBASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Gm43852-201ENSMUST00000202098 917 ntBASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-4Q9EQM3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms