Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk1aQ9D132 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk1aQ9D132 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.53□□□□□ -0.56
Upk1aQ9D132 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk1aQ9D132 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk1aQ9D132 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk1aQ9D132 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk1aQ9D132 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk1aQ9D132 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk1aQ9D132 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk1aQ9D132 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.52□□□□□ -0.56
Upk1aQ9D132 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Upk1aQ9D132 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.52□□□□□ -0.56
Upk1aQ9D132 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk1aQ9D132 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk1aQ9D132 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk1aQ9D132 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk1aQ9D132 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Gm13492-201ENSMUST00000119772 665 ntBASIC11.52□□□□□ -0.57
Upk1aQ9D132 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Gm27847-201ENSMUST00000183711 107 ntBASIC11.52□□□□□ -0.57
Upk1aQ9D132 Gm27375-201ENSMUST00000183799 107 ntBASIC11.52□□□□□ -0.57
Upk1aQ9D132 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Gm5035-201ENSMUST00000215581 927 ntBASIC11.52□□□□□ -0.57
Upk1aQ9D132 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.52□□□□□ -0.57
Upk1aQ9D132 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.52□□□□□ -0.57
Upk1aQ9D132 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk1aQ9D132 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Gm27839-201ENSMUST00000184242 106 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Gm8420-201ENSMUST00000097103 598 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.51□□□□□ -0.57
Upk1aQ9D132 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk1aQ9D132 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms