Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim13Q9CYB0 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm8213-201ENSMUST00000118191 441 ntBASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm10156-201ENSMUST00000122364 462 ntBASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm23984-201ENSMUST00000157139 203 ntBASIC11.27□□□□□ -0.61
Trim13Q9CYB0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm38671-201ENSMUST00000200573 130 ntBASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm9794-201ENSMUST00000202370 423 ntBASIC11.27□□□□□ -0.61
Trim13Q9CYB0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim13Q9CYB0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm2231-201ENSMUST00000125661 612 ntBASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm12091-201ENSMUST00000146791 830 ntBASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm26185-201ENSMUST00000157692 266 ntBASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Proscos-202ENSMUST00000178990 666 ntBASIC11.26□□□□□ -0.61
Trim13Q9CYB0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms