Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Gm19184-201ENSMUST00000196798 928 ntBASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Gm10268-201ENSMUST00000085340 555 ntBASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Gm16296-201ENSMUST00000159905 325 ntBASIC13.29□□□□□ -0.28
Ssr1Q9CY50 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Gm7029-201ENSMUST00000173226 450 ntBASIC13.29□□□□□ -0.28
Ssr1Q9CY50 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssr1Q9CY50 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm4984-201ENSMUST00000115987 360 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm24526-201ENSMUST00000082921 158 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms