Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Gm14659-201ENSMUST00000117667 843 ntBASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Gm13505-201ENSMUST00000121666 817 ntBASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Gm32999-201ENSMUST00000192693 562 ntBASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Gm37466-201ENSMUST00000195692 652 ntBASIC11.62□□□□□ -0.55
Otud1Q9CUB6 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Otud1Q9CUB6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm13996-201ENSMUST00000118456 430 ntBASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm14277-201ENSMUST00000121195 360 ntBASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm24380-201ENSMUST00000122696 324 ntBASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm16505-201ENSMUST00000179981 232 ntBASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm37604-201ENSMUST00000191749 1272 ntBASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm6649-201ENSMUST00000199743 1165 ntBASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 AC139323.1-201ENSMUST00000223370 1040 ntBASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Otud1Q9CUB6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.6□□□□□ -0.55
Otud1Q9CUB6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms