Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Gm19163-201ENSMUST00000223313 780 ntBASIC11.55□□□□□ -0.56
Ska1Q9CPV1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ska1Q9CPV1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Gm5035-201ENSMUST00000215581 927 ntBASIC11.54□□□□□ -0.56
Ska1Q9CPV1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ska1Q9CPV1 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms