Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.97□□□□□ -0.49
Trim8Q99PJ2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Gm43438-201ENSMUST00000198133 379 ntBASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Gm4768-201ENSMUST00000206199 686 ntBASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.97□□□□□ -0.49
Trim8Q99PJ2 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Gm12384-201ENSMUST00000119228 919 ntBASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Gm4271-201ENSMUST00000174444 973 ntBASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim8Q99PJ2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim8Q99PJ2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim8Q99PJ2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim8Q99PJ2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim8Q99PJ2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim8Q99PJ2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.96□□□□□ -0.5
Trim8Q99PJ2 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim8Q99PJ2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trim8Q99PJ2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gm27486-201ENSMUST00000184923 80 ntBASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms