Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rtn4rQ99PI8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rtn4rQ99PI8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rtn4rQ99PI8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gm24934-201ENSMUST00000103764 111 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gm14644-201ENSMUST00000116671 647 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gm6963-201ENSMUST00000147879 379 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gm45224-201ENSMUST00000208203 414 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Gm19994-201ENSMUST00000217086 586 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rtn4rQ99PI8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gm15276-201ENSMUST00000145953 498 ntBASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gm25700-201ENSMUST00000177693 110 ntBASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gm9996-201ENSMUST00000070359 913 ntBASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rtn4rQ99PI8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rtn4rQ99PI8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 271.1 ms