Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm10288-201ENSMUST00000084614 537 ntBASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Gm23045-201ENSMUST00000175041 96 ntBASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Gm27530-201ENSMUST00000184096 98 ntBASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Gm18801-201ENSMUST00000186616 536 ntBASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col25a1Q99MQ5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm22846-201ENSMUST00000157706 270 ntBASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm17214-201ENSMUST00000164501 541 ntBASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm37852-201ENSMUST00000193027 350 ntBASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm26448-201ENSMUST00000082446 203 ntBASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm6304-201ENSMUST00000096579 447 ntBASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col25a1Q99MQ5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms