Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Gm14017-201ENSMUST00000121934 386 ntBASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tlr3Q99MB1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm15547-201ENSMUST00000122152 333 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm18212-201ENSMUST00000211678 889 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm8712-201ENSMUST00000221090 701 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Matn2-203ENSMUST00000226766 3252 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.09□□□□□ -0.31
Tlr3Q99MB1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.08□□□□□ -0.31
Tlr3Q99MB1 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.08□□□□□ -0.31
Tlr3Q99MB1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Tlr3Q99MB1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Tlr3Q99MB1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms