Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gm6867-201ENSMUST00000219165 425 ntBASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-1Q99MA9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Gm7722-201ENSMUST00000120646 741 ntBASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Gm37299-201ENSMUST00000193951 826 ntBASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Gm19091-201ENSMUST00000208120 978 ntBASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-1Q99MA9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms