Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.73□□□□□ -0.69
Scrt1Q99M85 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Gm6407-201ENSMUST00000176468 549 ntBASIC10.73□□□□□ -0.69
Scrt1Q99M85 Gm27627-201ENSMUST00000183644 150 ntBASIC10.73□□□□□ -0.69
Scrt1Q99M85 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.73□□□□□ -0.69
Scrt1Q99M85 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Gm45598-202ENSMUST00000210719 986 ntBASIC10.73□□□□□ -0.69
Scrt1Q99M85 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.73□□□□□ -0.69
Scrt1Q99M85 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Gm10179-201ENSMUST00000086233 688 ntBASIC10.73□□□□□ -0.69
Scrt1Q99M85 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm12015-201ENSMUST00000117065 843 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm11675-201ENSMUST00000121873 832 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm28882-201ENSMUST00000185504 314 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm37246-201ENSMUST00000192665 835 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm39404-201ENSMUST00000216350 313 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.72□□□□□ -0.69
Scrt1Q99M85 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scrt1Q99M85 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.71□□□□□ -0.69
Scrt1Q99M85 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms