Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Snora73a-201ENSMUST00000082453 205 ntBASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp1b1Q99LU0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm27023-201ENSMUST00000182372 285 ntBASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm7399-201ENSMUST00000032395 858 ntBASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms