Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Gm4984-201ENSMUST00000115987 360 ntBASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Cdk5rap3Q99LM2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm25261-201ENSMUST00000157416 134 ntBASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm24548-201ENSMUST00000158650 108 ntBASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm16379-201ENSMUST00000161469 348 ntBASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm8762-201ENSMUST00000193486 339 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms