Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Gm15207-201ENSMUST00000119259 442 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 Gm11836-201ENSMUST00000121022 441 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Gm37458-201ENSMUST00000194055 410 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.85□□□□□ -0.35
Clp1Q99LI9 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Clp1Q99LI9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.84□□□□□ -0.35
Clp1Q99LI9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm37319-201ENSMUST00000193500 636 ntBASIC12.84□□□□□ -0.35
Clp1Q99LI9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm19091-201ENSMUST00000208120 978 ntBASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm2875-201ENSMUST00000211333 360 ntBASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.84□□□□□ -0.35
Clp1Q99LI9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clp1Q99LI9 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms