Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Gm26448-201ENSMUST00000082446 203 ntBASIC12.68□□□□□ -0.38
TrabdQ99JY4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TrabdQ99JY4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.67□□□□□ -0.38
TrabdQ99JY4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.67□□□□□ -0.38
TrabdQ99JY4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.67□□□□□ -0.38
TrabdQ99JY4 Mir6979-201ENSMUST00000183927 56 ntBASIC12.67□□□□□ -0.38
TrabdQ99JY4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Gm8956-201ENSMUST00000203939 825 ntBASIC12.67□□□□□ -0.38
TrabdQ99JY4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TrabdQ99JY4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.66□□□□□ -0.38
TrabdQ99JY4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.66□□□□□ -0.38
TrabdQ99JY4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.66□□□□□ -0.38
TrabdQ99JY4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 B9d1os-201ENSMUST00000137010 674 ntBASIC12.66□□□□□ -0.38
TrabdQ99JY4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Gm8343-201ENSMUST00000182705 994 ntBASIC12.66□□□□□ -0.38
TrabdQ99JY4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TrabdQ99JY4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms