Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm4034-201ENSMUST00000187674 480 ntBASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm45575-201ENSMUST00000210283 548 ntBASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdhb5Q91XZ5 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.33□□□□□ -0.11
Pcdhb5Q91XZ5 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdhb5Q91XZ5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb5Q91XZ5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.33□□□□□ -0.11
Pcdhb5Q91XZ5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Gm14460-201ENSMUST00000121511 639 ntBASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb5Q91XZ5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm15004-201ENSMUST00000119192 630 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm4726-201ENSMUST00000135604 736 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm6019-201ENSMUST00000148369 736 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm22144-201ENSMUST00000157402 102 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm9132-201ENSMUST00000210182 832 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm45398-201ENSMUST00000210561 165 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms