Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Gm11660-201ENSMUST00000120955 412 ntBASIC13.93□□□□□ -0.18
Trex1Q91XB0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Gm22144-201ENSMUST00000157402 102 ntBASIC13.93□□□□□ -0.18
Trex1Q91XB0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.93□□□□□ -0.18
Trex1Q91XB0 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.93□□□□□ -0.18
Trex1Q91XB0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.93□□□□□ -0.18
Trex1Q91XB0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.93□□□□□ -0.18
Trex1Q91XB0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trex1Q91XB0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.92□□□□□ -0.18
Trex1Q91XB0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.92□□□□□ -0.18
Trex1Q91XB0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Gm13888-201ENSMUST00000119148 422 ntBASIC13.92□□□□□ -0.18
Trex1Q91XB0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Gm9132-201ENSMUST00000210182 832 ntBASIC13.92□□□□□ -0.18
Trex1Q91XB0 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.92□□□□□ -0.18
Trex1Q91XB0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.92□□□□□ -0.18
Trex1Q91XB0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trex1Q91XB0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms