Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Gm13296-201ENSMUST00000117854 997 ntBASIC12.67□□□□□ -0.38
Usp3Q91W36 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.67□□□□□ -0.38
Usp3Q91W36 Gm45224-201ENSMUST00000208203 414 ntBASIC12.67□□□□□ -0.38
Usp3Q91W36 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 AC132433.1-201ENSMUST00000221553 1101 ntBASIC12.67□□□□□ -0.38
Usp3Q91W36 AC154441.1-201ENSMUST00000223653 1006 ntBASIC12.67□□□□□ -0.38
Usp3Q91W36 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp3Q91W36 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp3Q91W36 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm5277-201ENSMUST00000164923 556 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm2383-201ENSMUST00000181461 807 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm29199-201ENSMUST00000187766 775 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm10925-201ENSMUST00000189941 678 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm37684-201ENSMUST00000192779 355 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp3Q91W36 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 AC165260.4-201ENSMUST00000225924 724 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.66□□□□□ -0.38
Usp3Q91W36 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Usp3Q91W36 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp3Q91W36 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp3Q91W36 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Usp3Q91W36 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Usp3Q91W36 Gm8312-201ENSMUST00000119380 618 ntBASIC12.65□□□□□ -0.38
Usp3Q91W36 Gm14017-201ENSMUST00000121934 386 ntBASIC12.65□□□□□ -0.38
Usp3Q91W36 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Usp3Q91W36 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Gm37073-201ENSMUST00000192469 1222 ntBASIC12.65□□□□□ -0.38
Usp3Q91W36 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.65□□□□□ -0.38
Usp3Q91W36 CT030194.1-201ENSMUST00000225507 532 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms