Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx1Q91V10 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.09□□□□□ -0.47
Vsx1Q91V10 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx1Q91V10 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx1Q91V10 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Vsx1Q91V10 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vsx1Q91V10 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gm17889-201ENSMUST00000198410 598 ntBASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gm6905-201ENSMUST00000205729 511 ntBASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gm2517-201ENSMUST00000215651 348 ntBASIC12.08□□□□□ -0.48
Vsx1Q91V10 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gm9996-201ENSMUST00000070359 913 ntBASIC12.08□□□□□ -0.48
Vsx1Q91V10 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Vsx1Q91V10 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.07□□□□□ -0.48
Vsx1Q91V10 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.07□□□□□ -0.48
Vsx1Q91V10 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Mir7076-201ENSMUST00000183519 74 ntBASIC12.07□□□□□ -0.48
Vsx1Q91V10 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Gm3793-201ENSMUST00000204973 672 ntBASIC12.07□□□□□ -0.48
Vsx1Q91V10 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.07□□□□□ -0.48
Vsx1Q91V10 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.07□□□□□ -0.48
Vsx1Q91V10 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.07□□□□□ -0.48
Vsx1Q91V10 Gm807-202ENSMUST00000224929 408 ntBASIC12.07□□□□□ -0.48
Vsx1Q91V10 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx1Q91V10 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms