Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb11Q91UZ8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb11Q91UZ8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb11Q91UZ8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms