Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm13045-201ENSMUST00000119019 712 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm25881-201ENSMUST00000157783 103 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm2965-201ENSMUST00000198365 343 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm5369-201ENSMUST00000217499 588 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm43589-201ENSMUST00000199400 1523 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.06□□□□□ -0.32
TraipQ8VIG6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TraipQ8VIG6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm12857-201ENSMUST00000117678 592 ntBASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm12501-201ENSMUST00000119163 529 ntBASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm8566-201ENSMUST00000120174 465 ntBASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm22902-201ENSMUST00000158488 302 ntBASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm4034-201ENSMUST00000187674 480 ntBASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm37436-201ENSMUST00000193842 1085 ntBASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.05□□□□□ -0.32
TraipQ8VIG6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm5705-201ENSMUST00000066241 711 ntBASIC13.05□□□□□ -0.32
TraipQ8VIG6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TraipQ8VIG6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms