Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm11618-201ENSMUST00000117946 267 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm25927-201ENSMUST00000175058 117 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm22121-201ENSMUST00000175148 54 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm17872-201ENSMUST00000222550 532 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm2423-201ENSMUST00000074863 733 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpa1Q8VEE4 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpa1Q8VEE4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpa1Q8VEE4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Rpa1Q8VEE4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa1Q8VEE4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms