Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cuedc1Q8R3V6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm14208-201ENSMUST00000119645 678 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm11978-201ENSMUST00000122315 466 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm45394-201ENSMUST00000209240 1175 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cuedc1Q8R3V6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Gm13492-201ENSMUST00000119772 665 ntBASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Mir1943-201ENSMUST00000158276 73 ntBASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Gm7467-201ENSMUST00000185173 652 ntBASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 CT010431.1-201ENSMUST00000221249 1080 ntBASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms